BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E07SP1|AL429412
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1000 1896 0.0
>3x_Contig1000
Length = 4837
Score = 1896 bits (955), Expect = 0.0
Identities = 960/963 (99%)
Strand = Plus / Minus
Query: 1 caaagagcttcgtttragttttttaagacatctgattctattgaaagaaactcaatgatt 60
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1959 caaagagcttcgtttgagttttttaagacatctgattctattgacagaaactcaatgatt 1900
Query: 61 tgttcttgtattgaagaggcgctcatcttggatcctagttgcagtaaaatatttgtaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 tgttcttgtattgaagaggcgctcatcttggatcctagttgcagtaaaatatttgtaaca 1840
Query: 121 ttttcgtacgctgtagatgatattttcggaattatggaaacttcagaattattaagagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1839 ttttcgtacgctgtagatgatattttcggaattatggaaacttcagaattattaagagat 1780
Query: 181 cccgatgttaccaagtagtttacctctgaactggtaaccttaattaaattaatgttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 cccgatgttaccaagtagtttacctctgaactggtaaccttaattaaattaatgttctct 1720
Query: 241 gttttgtctaaactcaacaaatgggttttcaaagagtcatatattccataagcaacagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 gttttgtctaaactcaacaaatgggttttcaaagagtcatatattccataagcaacagtt 1660
Query: 301 tttgatatttgatattcctcaagctgatctgtatccaaaattcttaatgcattattcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 tttgatatttgatattcctcaagctgatctgtatccaaaattcttaatgcattattcaca 1600
Query: 361 atattatattggttgatttcttcgaagtttgtttcgacctgaatattgttatctctcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 atattatattggttgatttcttcgaagtttgtttcgacctgaatattgttatctctcatg 1540
Query: 421 aatgctgcaatatcgttcttgaatctttctaatgcaaagacgttatcccttgctactgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 aatgctgcaatatcgttcttgaatctttctaatgcaaagacgttatcccttgctactgta 1480
Query: 481 agagccgtctttagtataacttctctgcacccataaagtgaattatggcatttattaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 agagccgtctttagtataacttctctgcacccataaagtgaattatggcatttattaagt 1420
Query: 541 agtagaacacaagcttcaaatagttcaccattcagtttttcattattccttttagtgagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 agtagaacacaagcttcaaatagttcaccattcagtttttcattattccttttagtgagc 1360
Query: 601 tttgaaaaggtgggttcaagtgcgcgtttcaattgaattgatgtggcatttaaccatttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 tttgaaaaggtgggttcaagtgcgcgtttcaattgaattgatgtggcatttaaccatttg 1300
Query: 661 gtagttctgtgctttcctggattttttacttcaacagcagtatttcctgtagacgttttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 gtagttctgtgctttcctggattttttacttcaacagcagtatttcctgtagacgttttg 1240
Query: 721 atgaaagtttccaaagaagagtcaccatataccatacacaatagttctgacatagtcgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 atgaaagtttccaaagaagagtcaccatataccatacacaatagttctgacatagtcgat 1180
Query: 781 aatacatcacttgccactttcacatgagtagtcaaccctggacgagagagaatcttagca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aatacatcacttgccactttcacatgagtagtcaaccctggacgagagagaatcttagca 1120
Query: 841 aatgtagagacatttccgggaaccacattacttaacatttctccgtcatttattactctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 aatgtagagacatttccgggaaccacattacttaacatttctccgtcatttattactctg 1060
Query: 901 tacagtaatcttagtgtttttgagctctctaactggattgacatattgctattttctaaw 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 tacagtaatcttagtgtttttgagctctctaactggattgacatattgctattttctaat 1000
Query: 961 aat 963
|||
Sbjct: 999 aat 997
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8420
Number of Sequences: 1807
Number of extensions: 8420
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)